Maguire, F., B. Alcock, A.R. Raphenya, B. Jia. E.J. Griffiths, T.C. Matthews, J. Adam, A. Petkau, G.L. Winsor, IRIDA Consortium, R.G. Beiko, F.S.L. Brinkman, W.W.L. Hsiao. G. Van Domselaar, A.G. McArthur. 2019. Integrated Rapid Infectious Disease Analysis: A comprehensive platform for public health bioinformatics and AMR surveillance using genomic data. Poster presentation at the Canadian Society of Microbiologists Annual Meeting, Sherbrooke, Quebec.
Maguire, F., B. Jia, B. Alcock, A.R. Raphenya, F.S.L. Brinkman, A.G. McArthur, & R.G. Beiko. 2019. Precise identification of antimicrobial resistance determinants from metagenomic data. Oral presentation at the Canadian Society of Microbiologists Annual Meeting, Sherbrooke, Quebec.
Alcock, B.P., A.R. Raphenya, F. Maguire, F.S. Brinkman, R.G. Beiko, & A.G. McArthur. 2019. Resistome and variant prediction for improved antimicrobial surveillance with the Comprehensive Antibiotic Resistance Database. Poster presentation at the American Society for Microbiology Microbe Meeting, San Francisco, California.
Raphenya, A.R., T.T.Y. Lau, B. Alcock, K.K. Tsang, F. Maguire, F.S. Brinkman, R.G. Beiko, & A.G. McArthur. 2019. Resistance Gene Identifier (RGI) – Prediction of antimicrobial resistance genes and mutations for genomic and metagenomic sequencing data. Oral presentation at the American Society for Microbiology Microbe Meeting, San Francisco, California.
Chen, J. C.-Y., C.G. Clark, A. Bharat, A.G. McArthur, M.R. Graham, G.R. Westmacott, & G. Van Domselaar. 2019. Detection of antimicrobial resistance using proteomics and the Comprehensive Antibiotic Resistance Database: A case study. Presentation at 27th Conference on Intelligent Systems in Molecular Biology & 18th European Conference on Computational Biology, Basel, Switzerland.
Tsang, K.K., F. Maguire, H. Zubyk, S. Chou, G.D. Wright, R.G. Beiko, & A.G. McArthur. 2019. Combining multiple features and algorithms to learn antimicrobial resistance genotype-phenotype relationships. Poster presentation at 27th Conference on Intelligent Systems in Molecular Biology & 18th European Conference on Computational Biology, Basel, Switzerland.
Griffiths, E., D. Dooley, G. Gosal, I. Gill, S. Russell, L. Tindale, V. Pichler, T. Matthews, A. Petkau, J. Adam, D. Fornika, G. Winsor, F. Maguire, B. Alcock, The IRIDA Consortium, A.G. McArthur, R. Beiko, M. Graham, F. Brinkman, G. van Domselaar, & W. Hsiao. 2019. Empowering data sharing for genomics-based public health surveillance using ontologies. Presentation at the 12th International Meeting On Epidemiological Markers (IMMEMXII), Dubrovnik, Croatia.
Matthews, T., F. Bristow, A. Petkau, J. Adam, J. Thiessen, S. Sidhu, P. Kruczkiewicz, D. Dooley, E. Griffiths, D. Fornika, G. Winsor, M. Graham, The IRIDA Consortium, A.G. McArthur, E. Taboada, R. Beiko, F. Brinkman, W. Hsiao, & Gary van Domselaar. 2019. Canada’s Integrated Rapid Infectious Disease Analysis Platform (IRIDA). Presentation at the 12th International Meeting On Epidemiological Markers (IMMEMXII), Dubrovnik, Croatia.
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Day, E.A., R.J. Ford, B.K. Smith, P. Mohammadi-Shemirani, M.R. Morrow, R.M. Gutgesel, R. Lu, A.R. Raphenya, A.G. McArthur, N. McInnes, G. Paré, H.C. Gerstein, & G.R. Steinberg. 2019. GDF15 is a metformin stimulated hepatokine that is important for promoting weight loss. Presentation at the Lunenfeld-Tanenbaum International Symposium: Translational Diabetes and Metabolism Research Day, Toronto, Ontario.
Griffiths, E., T. Matthews, A. Petkau, J. Adam, D. Dooley, D. Fornika, G. Winsor, F. Maguire, B. Alcock, The IRIDA Consortium, A.G. McArthur, R. Beiko, M. Graham, F. Brinkman, G. van Domselaar, & W. Hsiao. 2019. Empowering local to global WGS-based surveillance and investigation: The Integrated Rapid Infectious Disease Analysis (IRIDA) Platform. Presentation at the Meeting on Global Microbial Identifier, Singapore.
Matthews, T., J. Adam, A. Petkau, F. Maguire, B. Alcock, A.R. Raphenya, E.J. Griffiths, D. Dooley, B. Jia, G.L. Winsor, The IRIDA Consortium, R.G. Beiko, A.G. McArthur, F.S.L. Brinkman, G.L. Van Domselaar, & W.W.L. Hsiao. 2019. Integrated Rapid Infectious Disease Analysis (IRIDA): a comprehensive and distributed platform for public health genomic epidemiology. Poster presentation at the 2019 Applied Bioinformatics and Public Health Microbiology (ABPHM) Meeting, Cambridge, United Kingdom.
Petkau, A., T. Matthews, F. Bristow, J. Adam, J. Thiessen, S. Sidhu, P. Kruczkiewicz, E. Griffiths, D. Dooley, D. Fornika, G. Winsor, M. Graham, A.R. Raphenya, The IRIDA consortium, E. Taboada, A.G. McArthur, R. Beiko, W. Hsiao, F. Brinkman, G. Van Domselaar. 2019. The IRIDA Platform for Microbial Genomics. Oral presentation at the 2019 Galaxy Community Conference, Freiburg, Germany.
Porter, A.F., A.T. Duggan, J. Klunk, E.C. Holmes, H. Poinar, A.N. Dhody, R. Hicks, G. Smith, M. Humpherys, A. McCollum, W. Davidson, K. Wilkins, Y. Li, A. Burke, H. Polasky, L. Flanders, D. Poinar, A.R. Raphenya, B. Alcock, T.T. Lau, A.G. McArthur, & B. Golding. 2019. Unraveling the evolutionary history of the vaccinia virus, the vaccine for smallpox. Presentation at the Annual Meeting of the Society for Molecular Biology and Evolution, Manchester Central, United Kingdom.
