Raphenya et al. Scientific Data volume 9, Article number: 341 (2022). Whole genome sequencing (WGS) is a key tool in identifying and characterising disease-associated bacteria
Category: bioinformatics
Rooney et al. 2022 Jun 1;e0002222. Short-read sequencing can provide detection of multiple genomic determinants of antimicrobial resistance from single bacterial genomes and metagenomic samples.
antibiotic resistance bioinformatics databases genomics molecular epidemiology publications software
Enabling genomic island prediction and comparison in multiple genomes to investigate bacterial evolution and outbreaks
Bertelli et al. Microb Genom. 2022 May;8(5). doi: 10.1099/mgen.0.000818. Outbreaks of virulent and/or drug-resistant bacteria have a significant impact on human health and major economic
Sanderson et al. 2022. bioRxiv 10.1101/2022.04.11.487771. Enterococcus faecium is a ubiquitous opportunistic pathogen that is exhibiting increasing levels of antimicrobial resistance (AMR). Many of the
Karyn Mukiri – Predicting the Total Resistome Mugdha Dave – Creation and standardization of automated bacterial pathogen genomic sequencing reporting through informatics
The McArthur lab welcomes Madeline McCarthy, a recent MSc graduate of VIDO / USask, as she join us for her PhD studies in the McMaster
awards bioinformatics epidemiology genomics IIDR lab members news SARS-CoV-2 software virus epidemiology
Jalees Nasir awarded 2021 Fred & Helen Knight Enrichment Award!
Congratulations to PhD student Jalees Nasir, who has been awarded the prestigious 2021 Fred & Helen Knight Enrichment Award, which recognizes exceptional promise in early
All online this year due to COVID-19, but some great presentations and virtual posters by our trainees and collaborators! Edalatmand, A. & A.G. McArthur. 2021.
Ashley M. Rooney, Amogelang R. Raphenya, Roberto G. Melano, Christine Seah, Noelle R. Yee, Derek R. MacFadden, Andrew G. McArthur, Pierre H.H. Schneeberger, Bryan Coburn.
Pankov, K.V., A.G. McArthur, D.A. Gold, D.R. Nelson, J.V. Goldstone, J.Y. Wilson. Scientific Reports. 2021 May 10;11(1):9834. The cytochrome P450 (CYP) superfamily is a diverse