Komorowski et al. 2025. Journal of Infectious Diseases, in press. Background: Serratia marcescens is an opportunistic AmpC β-lactamase-producing Enterobacterales associated with intensive care unit outbreaks,
Category: clinical metadata
Baker et al. 2025. Journal of the Association of Medical Microbiology and Infectious Disease Canada, in press. Background: Clostridioides difficile is a bacillus that can
clinical metadata COVID19 genomics molecular epidemiology publications SARS-CoV-2 virus epidemiology
Chronic COVID-19 infection in an immunosuppressed patient shows changes in lineage over time: a case report
Sheridan J C Baker , Landry E Nfonsam , Daniela Leto , Candy Rutherford , Marek Smieja , & Andrew G McArthur Virol J. 2024
The McArthur lab welcomes Brody Duncan, M.D. (Hamilton Health Sciences) as he starts his M.Sc. studies with us, investigating standards and methods for clinical reporting
big data clinical metadata epidemiology molecular epidemiology publications SARS-CoV-2 virus epidemiology
The Dataharmonizer: a Tool for Faster Data Harmonization, Validation, Aggregation, and Analysis of Pathogen Genomics Contextual Information
Gill et al. 2022. Preprints 10.20944/preprints202206.0335.v1 Pathogen genomics is a critical tool for public health surveillance, infection control, outbreak investigations, as well as research. In
We welcome (left to right) Malvika Agarwal, Megane Bouchard, Amro Elrafie, and Hafsa Omer to the lab as data curation volunteers, working collectively to collate
We welcome (left to right) Arman Edalatmand, Mateusz Faltyn, and Magda Lesinski to the lab as data curation volunteers, working collectively to collate important clinical