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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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antibiotic resistance bioinformatics databases ecotoxicogenomics presentations

Conference Presentations!

June 17, 2017December 30, 2020 agmcarthur

We haven’t been travelling much this year, but our collaborators have been busy! Dearborn, D.C., A.B. Gager, A.G. McArthur, M.E. Gilmour, E. Mandzhukova, R.A. Mauck.

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antibiotic resistance lab members Mitacs

Welcome Anastasia Koutoucheva!

June 5, 2017December 30, 2020 agmcarthur

Anastasia joins us & the IIDR for Summer 2017 from the Center for Genomic Sciences, UNAM, Cuernavaca, Mexico as part of her successful competition for a Mitacs

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awards lab members

Kara Tsang awarded an Ontario Graduate Scholarship & an inaugural MacDATA Graduate Fellowship!

May 8, 2017December 30, 2020 agmcarthur

Well done Kara! The OGS is a provincial merit-based scholarship, with awards available to graduate students in all disciplines of academic study, while the MacDATA Graduate Fellowship

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awards lab members

Arjun Sharma awarded a 2017 IIDR Summer Student Fellowship

May 3, 2017December 30, 2020 agmcarthur

Congratulations Arjun (top right)! See the details here.

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Nice way to finish the term: a poster presentation & a BDC Thesis Presentation award!

April 10, 2017December 30, 2020 agmcarthur
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awards BDC IIDR lab members news

Jonsson Liu wins World Health Organization Internship!

April 7, 2017December 30, 2020 agmcarthur
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lab members news

Biochem 3A03 & 3R06 Projects Completed!

April 4, 2017December 30, 2020 agmcarthur

Congratulations to our 3rd year Biochemistry & Biomedical Sciences students upon completion of their research projects! Both will be staying on as summer research students.

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antibiotic resistance BDC bioinformatics epidemiology Galaxy lab members ontologies P450 software

Completed 4th Year Biomedical Discovery & Commercialization Theses!

April 4, 2017December 30, 2020 agmcarthur

Congratulations to this year’s crop of BiomedDC 4A15 thesis students for 8 month research projects well done! From left to right: Suman Virdee – Developing a

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awards BDC lab members news

Suman Virdee wins CIHR Undergraduate Summer Studentship Award!

April 4, 2017December 30, 2020 agmcarthur

Congratulations to 4th Year Biomedical Discovery & Commercialization student and McArthur lab member Suman Virdee for her CIHR Undergraduate Summer Studentship Award for her summer

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phylogenetics publications

Functional relatedness in the Inv/Mxi-Spa Type III secretion system family

March 13, 2017December 30, 2020 agmcarthur

Klein JA, Dave BM, Raphenya AR, McArthur AG, Knodler LA. Mol Microbiol. 2017 Mar;103(6):973-991. Type III Secretion Systems (T3SSs) are structurally conserved nanomachines that span

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antibiotic resistance bioinformatics databases ontologies publications

Antimicrobial resistance surveillance in the genomic age

February 14, 2017December 30, 2020 agmcarthur

McArthur AG & Tsang KK. Ann N Y Acad Sci. 2017 Jan;1388(1):78-91. The loss of effective antimicrobials is reducing our ability to protect the global population from

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bioinformatics Galaxy IIDR lab members

Welcome Tammy Lau!

January 10, 2017December 30, 2020 agmcarthur

3rd year Biochemistry & Biomedical Sciences student Tammy Lau has joined us for her Biochem 3A03 (Biochemical Research Practice) course. Tammy will be collaborating with

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antibiotic resistance big data bioinformatics databases publications

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.

January 4, 2017December 30, 2020 agmcarthur

Jia B, Raphenya AR, Alcock B, Waglechner N, Guo P, Tsang KK, Lago BA, Dave BM, Pereira S, Sharma AN, Doshi S, Courtot M, Lo

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antibiotic resistance bioinformatics ecotoxicogenomics lab members

Farewell Briony Lago!

January 3, 2017December 30, 2020 agmcarthur

This month we say farewell to Briony Lago as she returns to her undergraduate studies in Chemical Biology at McMaster. Briony joined us as part

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antibiotic resistance genomics publications

A diverse intrinsic antibiotic resistome from a cave bacterium

December 8, 2016December 30, 2020 agmcarthur

Pawlowski AC, Wang W, Koteva K, Barton HA, McArthur AG, & Wright GD. Nat Commun. 2016 Dec 8;7:13803. Antibiotic resistance is ancient and widespread in

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antibiotic resistance news publications

Forum on Genomics and Antimicrobial Resistance – Workshop Report

December 1, 2016December 30, 2020 agmcarthur

The McArthur lab and the Comprehensive Antibiotic Resistance Database are proud to have contributed to the Genome Canada – Canadian Food Inspection Agency Forum on

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antibiotic resistance bioinformatics databases ecotoxicogenomics IIDR P450 phylogenetics presentations text mining

IIDR Trainee Day & USRA Poster Session 2016

November 8, 2016December 30, 2020 agmcarthur

Three of our undergraduate students gave poster presentations in the last month. Arjun Sharma (Biochemistry & Biomedical Sciences 3rd year) outlined his work on developing the

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antibiotic resistance big data bioinformatics publications

YphC and YsxC GTPases assist the maturation of the central protuberance, GTPase associated region and functional core of the 50S ribosomal subunit

October 11, 2016December 30, 2020 agmcarthur

Ni X, Davis JH, Jain N, Razi A, Benlekbir S, McArthur AG, Rubinstein JL, Britton RA, Williamson JR, Ortega J. Nucleic Acids Res. 2016 Sep

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ecotoxicogenomics publications

The transcription factor, Nuclear factor, erythroid 2 (Nfe2), is a regulator of the oxidative stress response during Danio rerio development

October 11, 2016December 30, 2020 agmcarthur

Williams LM, Lago BA, McArthur AG, Raphenya AR, Pray N, Saleem N, Salas S, Paulson K, Mangar RS, Liu Y, Vo AH, Shavit JA. Aquat

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population genomics publications

Gene duplication and divergence produce divergent MHC genotypes without disassortative mating

September 15, 2016December 30, 2020 agmcarthur

Authors: Dearborn DC, Gager AB, McArthur AG, Gilmour ME, Mandzhukova E, Mauck RA. Mol Ecol. 2016 Sep;25(17):4355-67. Genes of the major histocompatibility complex (MHC) exhibit

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