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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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antibiotic resistance genomes genomics

MACGENOM Survey Results

June 14, 2022June 14, 2022 Mugdha Dave

The burden of drug-resistant infections continues to threaten our arsenal of antibiotics. Despite the rise in genomic sequencing of clinical isolates, there is a lack

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antibiotic resistance bioinformatics databases genomes molecular epidemiology ontologies

Recent Updates to the Comprehensive Antibiotic Resistance Database

March 19, 2019December 30, 2020 agmcarthur

The Comprehensive Antibiotic Resistance Database has been updated, http://card.mcmaster.ca CARD Curation: Expanded MCR, OXA & IMP beta-lactamase, and macrolide phosphotransferase (MPH) sequence curation. Updated nomenclature

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antibiotic resistance epidemiology genomes genomics publications

Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium

October 21, 2015December 31, 2020 agmcarthur

Authors: Freschi et al. Front Microbiol. 2015 Sep 29;6:1036. The International Pseudomonas aeruginosa Consortium is sequencing over 1000 genomes and building an analysis pipeline for the study

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antibiotic resistance databases genomes publications

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis

July 8, 2015December 31, 2020 agmcarthur

Authors: Dhillon BK, Laird MR, Shay JA, Winsor GL, Lo R, Nizam F, Pereira SK, Waglechner N, McArthur AG, Langille MG, Brinkman FS. Nucleic Acids Res.

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4th ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens

May 7, 2015December 31, 2020 agmcarthur

McArthur, A.G., Waglechner, N., Nizam, F., Pereira, S.K., Jia, B., Sardar, D., Westman, E.L., Pawlowski, A.C., Johnson, T., Lo, R., Courtot, M., Brinkman, F.S., Williams,

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Internet of DNA

April 23, 2015December 31, 2020 agmcarthur

“A global network of millions of genomes could be medicine’s next great advance.” See the full article at the MIT Tech Review: Internet of DNA.

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