Antimicrobial Resistance: Emergence, Transmission, and Ecology (ARETE). R. Beiko (PI; Dalhousie University), F. Brinkman (co-PI, Simon Fraser University), A.G. McArthur (co-Applicant) + 4 additional co-Applicants.
Category: genomics
Some invitations are more special than others. Dr. Peixoto da Cruz and I went to graduate school together in British Columbia (a long time ago!)
Tsang, K.K., H. Zubyk, S. Chou, G.D. Wright, & A.G. McArthur. Decoding bad bags: Predicting antibiotic resistance phenotypes from genotype. Oral presentation at the Canadian Society of
Alcock, B., A.R. Raphenya, A.N. Sharma, K.K. Tsang, T.T.Y. Lau, A. Hernandez-Koutoucheva, & A.G. McArthur. 2018. Data and curation in the Comprehensive Antibiotic Resistance Database.
Kara Tsang passed her graduate transfer exam today, officially moving from the McMaster Biochemistry & Biomedical Sciences Masters program to the Ph.D. program. Kara’s work
Tammy Lau has been awarded a prestigious Michael G. DeGroote Institute for Infectious Disease Research (IIDR) Summer Student Fellowship for her work on development of k-mer approaches
antibiotic resistance big data bioinformatics databases epidemiology genomics molecular epidemiology news software
Recent Updates to the Comprehensive Antibiotic Resistance Database
The Comprehensive Antibiotic Resistance Database has been updated, http://card.mcmaster.ca CARD Curation: Addition of HERA, TRU, & ACI beta-lactamases, sul4, and new quinolone efflux pumps. Antibiotic
The Comprehensive Antibiotic Resistance Database: Expanded tools for molecular surveillance of antimicrobial resistance (AMR) in the environment, agriculture, and clinic. A.G. McArthur (PI), G. Van
The McArthur lab and the Comprehensive Antibiotic Resistance Database are proud to join the Canadian Anti-Infective Innovation Network, International Genomic Epidemiology Application Ontology Consortium, and Integrated Rapid
antibiotic resistance big data bioinformatics databases epidemiology genomics molecular epidemiology news software
Major Update of the Comprehensive Antibiotic Resistance Database
The Comprehensive Antibiotic Resistance Database has been updated, http://card.mcmaster.ca This February 2018 release is our largest to date and includes new data types, a new
Building upon her successful Biochem 3A03 project, Tammy Lau is staying in the lab for 2017-2018 as part of her Biochem 4T15 Research Thesis. Tammy’s
Pawlowski AC, Wang W, Koteva K, Barton HA, McArthur AG, & Wright GD. Nat Commun. 2016 Dec 8;7:13803. Antibiotic resistance is ancient and widespread in
A cross-national research consortia co-led by McMaster’s Andrew McArthur is receiving two of 16 federal grants to further develop a big data solution to the
McArthur, A.G., B. Jia, A.R. Raphenya, P. Guo, K. Tsang, B. Dave, B. Alcock, B. Lago, N. Waglechner, & G.D. Wright. 2016. The Comprehensive Antibiotic Resistance
Congratulations to Kara Tsang and Zachary Lin on completion of their Biomedical Discovery and Commercialization (BDC) 4A15 thesis research! Both Kara & Zachary presented their research
Combatting Antibiotic Resistance Using Surveillance – click on the image to watch the 10 minute video. More details here.
antibiotic resistance BDC bioinformatics databases epidemiology Galaxy genomics lab members presentations
The Inaugural Biomedical Discovery & Commercialization (BDC) Symposium
Zachary Lin – Adapting Galaxy bioinformatics to outbreak-associated Clostridium difficile The completion of the human genome project in 2001 sparked the beginning of a sequencing revolution
A new NIH-funded collaboration with Dr. Larissa Williams, Bates College, USA that applies transcriptomic approaches to examination of the role Nfe2 in oxidative stress response during
http://traineeday2015.mcmasteriidr.ca
Authors: Freschi et al. Front Microbiol. 2015 Sep 29;6:1036. The International Pseudomonas aeruginosa Consortium is sequencing over 1000 genomes and building an analysis pipeline for the study