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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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COVID19 genomics molecular epidemiology publications SARS-CoV-2 virus epidemiology

Temporal dynamics and evolution of SARS-CoV-2 demonstrate the necessity of ongoing viral genome sequencing in Ontario, Canada

May 8, 2021May 8, 2021 agmcarthur

Sjaarda, C.P., J.L. Guthrie, S. Mubareka, J.T. Simpson, B. Hamelin, H. Wong, L. Mortimer, R. Slinger, A.G. McArthur, M. Desjardins, K. Douchant, Ontario’s COVID-19 Genomics

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Congratulations to the 2021 DBCAD & IIDR Undergraduate Summer Student Fellowship recipients!

May 4, 2021 agmcarthur

Congratulations Emily Panousis on being awarded a 2021 IIDR Summer Student Fellowship! For nine years now, these awards have supported trainees working in IIDR and

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antibiotic resistance awards COVID19 lab members molecular epidemiology presentations SARS-CoV-2 virus epidemiology

WISE CREST, Ontario Biology Day, BBS Research Symposium 2021

March 24, 2021March 25, 2021 agmcarthur

McMaster Biochemistry & Biomedical Sciences Research Symposium Edalatmand. A. & A.G. McArthur. 2021. Ontology-driven method of contextualizing antimicrobial resistance determinants. Poster presentation at the McMaster

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COVID19 molecular epidemiology outreach publications SARS-CoV-2 virus epidemiology

OpEd: SARS-CoV-2 variants of concern remind us that we underestimate biology at our own peril

March 16, 2021March 16, 2021 agmcarthur

Imagine a tiny molecular machine armed with a program to infect human cells, subvert their defenses and make copies of itself to infect neighboring cells

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bioinformatics COVID19 epidemiology genomics molecular epidemiology SARS-CoV-2 virus epidemiology

Genomic Epidemiology of SARS-CoV-2: Canada & Ontario

January 15, 2021January 15, 2021 agmcarthur

In collaboration with our colleague Dr. Finlay Maguire (Dalhousie University) and as part of our ongoing work for Ontario’s COVID-19 Genomics Rapid Response Coalition and the Canadian

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bioinformatics genomics molecular epidemiology publications virulence

Whole genome sequence of Corynebacterium kroppenstedtii isolated from a case of recurrent granulomatous mastitis

December 29, 2020February 7, 2021 agmcarthur

Charlie Tan, Fang-I Lu, Patryk Aftanas, Kara Tsang, Samira Mubareka, Adrienne Chan, & Robert Kozak IDCases. 2020. 23:e01034. We describe the case of a 33-year-old

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IIDR Trainee Day 2020! Forging the Future of Infectious Disease Research

November 11, 2020December 30, 2020 agmcarthur

Nasir, J.A et al. 2020. SIGNALing the Need for Surveillance: A Comparison of Whole Genome Sequencing Methods for SARS-CoV-2. Edalatmand, A. & A.G. McArthur. 2020.

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McArthur Lab & McMaster contribute to global genomic surveillance of SARS-CoV-2

October 21, 2020December 30, 2020 agmcarthur

 

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A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait Capture

August 18, 2020December 30, 2020 agmcarthur

Jalees A. Nasir, Robert A. Kozak, Patryk Aftanas, Amogelang R. Raphenya, Kendrick M. Smith, Finlay Maguire, Hassaan Maan, Muhannad Alruwaili, Arinjay Banerjee, Hamza Mbareche, Brian

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COVID19 molecular epidemiology publications SARS-CoV-2 virulence virus epidemiology

Preprint: Early temporal dynamics of cellular responses to SARS-CoV-2

June 30, 2020December 30, 2020 agmcarthur

Arinjay Banerjee, Patrick Budylowski, Daniel Richard, Hassaan Maan, Jennifer A. Aguiar, Nader El-Sayes, Michael R. D’Agostino, Benjamin J.-M. Tremblay, Sam Afkhami, Mehran Karimzadeh, Lily Yip,

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Genotyping SARS-CoV-2 through an interactive web application

June 14, 2020December 30, 2020 agmcarthur

Maan, H., H. Mbareche, A.R. Raphenya, A. Banerjee, J.A. Nasir, R.A. Kozak, N. Knox, S. Mubareka, A.G. McArthur, & B. Wang. The Lancet Digital Health,

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Welcome Ahmed Draia!

May 29, 2020December 30, 2020 agmcarthur

The McArthur lab welcomes Ahmed Draia for an internship placement as part of McMaster’s Masters of Biomedical Discovery & Commercialization (MBDC) program. Reflective of his

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antibiotic resistance bioinformatics databases genomics IIDR lab members molecular epidemiology ontologies

New CARD Team Member!

May 2, 2020December 30, 2020 agmcarthur

The McArthur lab welcomes new Curator-Developer William Huynh to the Comprehensive Antibiotic Resistance Database staff. Looking forward to pushing CARD forward with William’s help!

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antibiotic resistance genomics lab members molecular epidemiology

New PhD Student!

April 27, 2020December 30, 2020 agmcarthur

Welcome Ashraf Bazan, who has joined the lab and the McMaster Biochemistry & Biomedical Sciences graduate program! A familiar face in the IIDR as he started

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antibiotic resistance bioinformatics databases genomics IIDR lab members molecular epidemiology ontologies

Congratulations finishing thesis students!

April 6, 2020December 30, 2020 agmcarthur

COVID19 kept us from celebrating together, but we are very proud of the work you have accomplished! Rachel Tran | Biochem 4T15 – Exploring the

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McArthur Lab & CARD during SARS-CoV-2

March 23, 2020December 30, 2020 agmcarthur

Quick update on the status of the McArthur Lab and the Comprehensive Antibiotic Resistance Database. While our home institution McMaster University is closed to on-site

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Preprint: Rapid design of a bait capture platform for culture- and amplification-free next-generation sequencing of SARS-CoV-2

February 26, 2020December 30, 2020 agmcarthur

Nasir, J.A., D.J. Speicher, R.A. Kozak, H.N. Poinar, M.S. Miller, & A.G. McArthur. Preprints 2020, 2020020385. SARS-CoV-2 is a novel betacoronavirus and the aetiological agent

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molecular epidemiology phylogenetics publications

An interbacterial toxin inhibits target cell growth by synthesizing (p)ppApp

November 6, 2019December 30, 2020 agmcarthur

Ahmad S, Wang B, Walker MD, Tran H-KR, Stogios PJ, Savchenko A, Grant RA, McArthur AG, Laub MT, Whitney JC Nature 2019 Nov 6. [Epub

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CARD 2020: antibiotic resistome surveillance with the Comprehensive Antibiotic Resistance Database

October 30, 2019December 30, 2020 agmcarthur

Alcock BP, Raphenya AR, Lau TTY, Tsang KK, Bouchard M, Edalatmand A, Huynh W, Nguyen A-LV, Cheng AA, Liu S, Min SY, Miroshnichenko A, Tran

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MacData Summer School 2019

May 31, 2019December 30, 2020 agmcarthur

Dr. McArthur and PhD student Kara Tsang taught together at the 2019 MacData Institute Summer School, with Dr. McArthur reviewing biocuration and bioinformatics for genomic

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