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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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antibiotic resistance bioinformatics databases genomics IIDR lab members molecular epidemiology ontologies

New CARD Team Member!

May 2, 2020December 30, 2020 agmcarthur

The McArthur lab welcomes new Curator-Developer William Huynh to the Comprehensive Antibiotic Resistance Database staff. Looking forward to pushing CARD forward with William’s help!

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antibiotic resistance bioinformatics genomics lab members

Summer students!

May 2, 2020December 30, 2020 agmcarthur

The McArthur lab welcomes back summer students Rachel Tran & Arman Edalatmand plus first timers Marcel Jansen & Emily Panousis! These four will be covering

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antibiotic resistance bioinformatics databases genomics IIDR lab members molecular epidemiology ontologies

Congratulations finishing thesis students!

April 6, 2020December 30, 2020 agmcarthur

COVID19 kept us from celebrating together, but we are very proud of the work you have accomplished! Rachel Tran | Biochem 4T15 – Exploring the

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antibiotic resistance big data bioinformatics databases epidemiology genomics molecular epidemiology ontologies publications

CARD 2020: antibiotic resistome surveillance with the Comprehensive Antibiotic Resistance Database

October 30, 2019December 30, 2020 agmcarthur

Alcock BP, Raphenya AR, Lau TTY, Tsang KK, Bouchard M, Edalatmand A, Huynh W, Nguyen A-LV, Cheng AA, Liu S, Min SY, Miroshnichenko A, Tran

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antibiotic resistance big data bioinformatics genomics IIDR publications

Phylogenetic reconciliation reveals the natural history of glycopeptide antibiotic biosynthesis and resistance

August 19, 2019December 30, 2020 agmcarthur

Waglechner N, McArthur AG, Wright GD. Nat Microbiol. 2019 Aug 12. [Epub ahead of print] Glycopeptide antibiotics are produced by Actinobacteria through biosynthetic gene clusters

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antibiotic resistance big data bioinformatics databases genomics lab members molecular epidemiology outreach presentations

MacData Summer School 2019

May 31, 2019December 30, 2020 agmcarthur

Dr. McArthur and PhD student Kara Tsang taught together at the 2019 MacData Institute Summer School, with Dr. McArthur reviewing biocuration and bioinformatics for genomic

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antibiotic resistance bioinformatics genomics molecular epidemiology software

RGI 5 Released!

March 26, 2019December 30, 2020 agmcarthur

April 2019 big #card_release #RGI5! Resistance Gene Identifier Version 5: entirely new algorithms for metagenomics data, new options for genomes & assemblies. Extensively updated documentation,

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antibiotic resistance bioinformatics databases genomes molecular epidemiology ontologies

Recent Updates to the Comprehensive Antibiotic Resistance Database

March 19, 2019December 30, 2020 agmcarthur

The Comprehensive Antibiotic Resistance Database has been updated, http://card.mcmaster.ca CARD Curation: Expanded MCR, OXA & IMP beta-lactamase, and macrolide phosphotransferase (MPH) sequence curation. Updated nomenclature

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antibiotic resistance bioinformatics databases genomics IIDR molecular epidemiology ontologies presentations software teaching

State of the CARD 2019

January 31, 2019December 30, 2020 agmcarthur

A week of lectures, demos, and training for the Comprehensive Antibiotic Resistance Database During McMaster Spring Mid-Term Recess (February 18-24), the McArthur lab is pleased

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antibiotic resistance bioinformatics databases genomics ontologies

Some Recent Funding News…

November 15, 2018December 30, 2020 agmcarthur

Antimicrobial Resistance: Emergence, Transmission, and Ecology (ARETE). R. Beiko (PI; Dalhousie University), F. Brinkman (co-PI, Simon Fraser University), A.G. McArthur (co-Applicant) + 4 additional co-Applicants.

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