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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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antibiotic resistance genomics publications

Capturing the Resistome: A targeted capture method to reveal antibiotic resistance determinants in metagenomes

October 16, 2019December 30, 2020 agmcarthur

Guitor AK, Raphenya AR, Klunk J, Kuch M, Alcock B, Surette MG, McArthur AG, Poinar HN, Wright GD. Editor’s Pick! Antimicrobial Agents and Chemotherapy 2019 Oct

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antibiotic resistance big data bioinformatics genomics IIDR publications

Phylogenetic reconciliation reveals the natural history of glycopeptide antibiotic biosynthesis and resistance

August 19, 2019December 30, 2020 agmcarthur

Waglechner N, McArthur AG, Wright GD. Nat Microbiol. 2019 Aug 12. [Epub ahead of print] Glycopeptide antibiotics are produced by Actinobacteria through biosynthetic gene clusters

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parasitology publications

PCR detection of mixed and zoonoses Malaria using Plasmodium spp dynein light chain (dlc-tctex) gene

August 6, 2019December 30, 2020 agmcarthur

Kariuki MW, Githui E, McArthur AG, Aman RA, Njagi NM, Mwangemi AC, Kamau LW Annual Research & Review in Biology, 32, 1-12. Novel gene targets

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publications

Preprints!

July 19, 2019December 30, 2020 agmcarthur

Faltyn, M., B. Alcock, & A.G. McArthur. 2019. Evolution and nomenclature of the trimethoprim resistant dihydrofolate (dfr) reductases. Preprints 2019, 2019050137. [Preprint] Tsang, K.K., D.J.

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publications

Preprints!

March 15, 2019December 30, 2020 agmcarthur

Srinivasan, K.A., S.K. Virdee, & A.G. McArthur. 2019. Strandedness during cDNA synthesis, the stranded parameter in htseq-count, and analysis of RNA-Seq data. Preprints 2019, 2019030124.

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kinesiology publications

Failed recovery of glycemic control and myofibrillar protein synthesis with 2 wk of physical inactivity in overweight, prediabetic older adults.

July 16, 2018December 30, 2020 agmcarthur

McGlory C, von Allmen MT, Stokes T, Morton RW, Hector AJ, Lago BA, Raphenya AR, Smith BK, McArthur AG, Steinberg GR, Baker SK, Phillips SM

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population genomics publications

Genetic population structure of the round whitefish (Prosopium cylindraceum) in North America: multiple markers reveal glacial refugia and regional subdivision

May 25, 2018December 30, 2020 agmcarthur

Morgan TD, Graham CF, McArthur AG, Raphenya AR, Boreham DR, Manzon RG, Wilson JY, Lance SL, Howland KL, Patrick PH, Somers CM Canadian Journal of

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phylogenetics publications

Functional relatedness in the Inv/Mxi-Spa Type III secretion system family

March 13, 2017December 30, 2020 agmcarthur

Klein JA, Dave BM, Raphenya AR, McArthur AG, Knodler LA. Mol Microbiol. 2017 Mar;103(6):973-991. Type III Secretion Systems (T3SSs) are structurally conserved nanomachines that span

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antibiotic resistance bioinformatics databases ontologies publications

Antimicrobial resistance surveillance in the genomic age

February 14, 2017December 30, 2020 agmcarthur

McArthur AG & Tsang KK. Ann N Y Acad Sci. 2017 Jan;1388(1):78-91. The loss of effective antimicrobials is reducing our ability to protect the global population from

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antibiotic resistance big data bioinformatics databases publications

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.

January 4, 2017December 30, 2020 agmcarthur

Jia B, Raphenya AR, Alcock B, Waglechner N, Guo P, Tsang KK, Lago BA, Dave BM, Pereira S, Sharma AN, Doshi S, Courtot M, Lo

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