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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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ecotoxicogenomics graduation lab members

Congrats Krishna Srinivasan on your successful MSc defense!

September 5, 2018December 30, 2020 agmcarthur

CADMIUM EXPOSURE ALTERS GENE EXPRESSION OF LENS, RETINA, AND EYE-RELATED GENES IN ZEBRAFISH AND HUMAN LENS EPITHELIAL CELLS Vision is a crucial aspect of life

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kinesiology publications

Failed recovery of glycemic control and myofibrillar protein synthesis with 2 wk of physical inactivity in overweight, prediabetic older adults.

July 16, 2018December 30, 2020 agmcarthur

McGlory C, von Allmen MT, Stokes T, Morton RW, Hector AJ, Lago BA, Raphenya AR, Smith BK, McArthur AG, Steinberg GR, Baker SK, Phillips SM

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antibiotic resistance awards bioinformatics databases genomics lab members presentations

Kara Tsang wins Canadian Society of Microbiologists 2018 Top Student Oral Presentation Award!

June 22, 2018December 30, 2020 agmcarthur

Tsang, K.K., H. Zubyk, S. Chou, G.D. Wright, & A.G. McArthur. Decoding bad bags: Predicting antibiotic resistance phenotypes from genotype. Oral presentation at the Canadian Society of

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antibiotic resistance bioinformatics databases genomics lab members presentations twitter

68th Annual Canadian Society of Microbiologist Conference in Tweets

June 22, 2018December 30, 2020 agmcarthur

Alcock, B., A.R. Raphenya, A.N. Sharma, K.K. Tsang, T.T.Y. Lau, A. Hernandez-Koutoucheva, & A.G. McArthur. 2018. Data and curation in the Comprehensive Antibiotic Resistance Database.

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antibiotic resistance bioinformatics databases genomics lab members

Kara Tsang, Ph.D. Student

June 11, 2018December 30, 2020 agmcarthur

Kara Tsang passed her graduate transfer exam today, officially moving from the McMaster Biochemistry & Biomedical Sciences Masters program to the Ph.D. program. Kara’s work

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awards lab members McMaster teaching

Faculty of Health Science Research Plenary Awards

May 31, 2018December 30, 2020 agmcarthur

Kara Tsang wins the McMaster Faculty of Health Sciences Graduate Programs Outstanding Achievement & Excellence in Oral Presentation Awards! Her happy supervisor is honoured to

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population genomics publications

Genetic population structure of the round whitefish (Prosopium cylindraceum) in North America: multiple markers reveal glacial refugia and regional subdivision

May 25, 2018December 30, 2020 agmcarthur

Morgan TD, Graham CF, McArthur AG, Raphenya AR, Boreham DR, Manzon RG, Wilson JY, Lance SL, Howland KL, Patrick PH, Somers CM Canadian Journal of

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antibiotic resistance awards bioinformatics genomics IIDR lab members

Tammy Lau awarded a 2018 IIDR Summer Student Fellowship

May 11, 2018December 30, 2020 agmcarthur

Tammy Lau has been awarded a prestigious Michael G. DeGroote Institute for Infectious Disease Research (IIDR) Summer Student Fellowship for her work on development of k-mer approaches

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lab members

Summer Students 2018!

May 3, 2018December 30, 2020 agmcarthur

The McArthur lab welcomes Pardeep Gill, who will be performing a Biochem 3R06 project on the phylogenetic origins of AraC and NeuB proteins in collaboration

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news presentations

Government Outreach 2018

May 1, 2018December 30, 2020 agmcarthur

Dr. McArthur has been busy doing some Government outreach. In early 2018 he was a Panellist on Artificial Intelligence in Healthcare at Norwegian Health Ministry &

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antibiotic resistance big data bioinformatics databases epidemiology genomics molecular epidemiology news software

Recent Updates to the Comprehensive Antibiotic Resistance Database

April 16, 2018December 30, 2020 agmcarthur

The Comprehensive Antibiotic Resistance Database has been updated, http://card.mcmaster.ca CARD Curation: Addition of HERA, TRU, & ACI beta-lactamases, sul4, and new quinolone efflux pumps. Antibiotic

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awards BDC lab members

MBDC – Jonsson Lui & Kirill Pankov win Biogen Scholarships!

April 6, 2018December 30, 2020 agmcarthur

Congratulations to Jonsson Lui & Kirill Pankov, both alumni of the McArthur, for being awarded Biogen Scholarships as part of their Masters in Biomedical Discovery

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lab members presentations

Conference and Student Presentations for Spring 2018!

March 25, 2018December 30, 2020 agmcarthur

Florescu, A., B. Alcock, A. Raphenya, & A.G. McArthur. 2018. Incorporating phenotypic testing into ontological data sharing paradigms. Presentation at Ontario Biology Day, Waterloo, Ontario,

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bioinformatics epidemiology genomics

Some Funding News…

March 17, 2018December 30, 2020 agmcarthur

The Comprehensive Antibiotic Resistance Database: Expanded tools for molecular surveillance of antimicrobial resistance (AMR) in the environment, agriculture, and clinic. A.G. McArthur (PI), G. Van

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antibiotic resistance bioinformatics epidemiology genomics ontologies software

CAIN, GenEpiO & IRIDA

March 17, 2018December 30, 2020 agmcarthur

The McArthur lab and the Comprehensive Antibiotic Resistance Database are proud to join the Canadian Anti-Infective Innovation Network, International Genomic Epidemiology Application Ontology Consortium, and Integrated Rapid

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antibiotic resistance big data bioinformatics databases epidemiology genomics molecular epidemiology news software

Major Update of the Comprehensive Antibiotic Resistance Database

February 2, 2018December 30, 2020 agmcarthur

The Comprehensive Antibiotic Resistance Database has been updated, http://card.mcmaster.ca This February 2018 release is our largest to date and includes new data types, a new

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antibiotic resistance epidemiology lab members ontologies

Welcome Alexandra Florescu!

January 3, 2018December 30, 2020 agmcarthur

4th year Bachelor of Health Sciences student Alexandra Florescu has joined us for her Biochem 3A03 (Biochemical Research Practice) course. Alexandra will be collaborating with

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antibiotic resistance bioinformatics databases lab members presentations

Second ASM Conference On Rapid Applied Microbial Next-Generation Sequencing And Bioinformatic Pipelines

October 9, 2017December 30, 2020 agmcarthur

Tsang, K.K. & A.G. McArthur. 2017. Encoding the efflux pump phenomena. Oral presentation at the Second American Society for Microbiology Meeting on Rapid Applied Microbial

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antibiotic resistance bioinformatics genomics lab members software

Tammy Lau – Advancing the Resistance Gene Identifier

September 6, 2017December 30, 2020 agmcarthur

Building upon her successful Biochem 3A03 project, Tammy Lau is staying in the lab for 2017-2018 as part of her Biochem 4T15 Research Thesis. Tammy’s

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antibiotic resistance awards BDC bioinformatics databases Galaxy IIDR lab members

Farewell Arjun Sharma & Suman Virdee!

August 8, 2017December 30, 2020 agmcarthur

Today we say farewell to Arjun Sharma & Suman Virdee. Arjun joined the lab as a second year volunteer, staying to perform a Biochem 3R06

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