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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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The Superbugs are Coming. Data Science Can Help.

June 20, 2016December 31, 2020 agmcarthur

Read more at http://techonomy.com/2016/06/the-superbugs-are-coming-data-science-can-help/

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2nd Conference Rapid Microbial NGS and Bioinformatics: Translation Into Practice

June 14, 2016December 31, 2020 agmcarthur

McArthur, A.G., B. Jia, A.R. Raphenya, P. Guo, K. Tsang, B. Dave, B. Alcock, B. Lago, N. Waglechner, & G.D. Wright. 2016. The Comprehensive Antibiotic Resistance

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Recent McArthur Lab Presentations and Posters

June 14, 2016December 31, 2020 agmcarthur

McMaster Interdisciplinary Research Exposition (MIREx); Ontario Biology Day; Biomedical Discovery and Commercialization Engage Symposium; Rapid Microbial NGS and Bioinformatics: Translation Into Practice (Germany); Canadian Food Inspection Agency Forum on

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antibiotic resistance BDC bioinformatics epidemiology genomics lab members presentations

BDC Engage 2016!

April 6, 2016December 31, 2020 agmcarthur

Congratulations to Kara Tsang and Zachary Lin on completion of their Biomedical Discovery and Commercialization (BDC) 4A15 thesis research! Both Kara & Zachary presented their research

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Arjun Sharma – creator of the new AMR Forums

February 4, 2016December 31, 2020 agmcarthur

Arjun Sharma is a 2cd year Biochemistry & Biomedical Sciences student how as a volunteer designed and created the new AMR Forums! Learn more about

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Big Ideas Better Cities – Health and Social Innovation through Big Data – Full Video

January 12, 2016December 31, 2020 agmcarthur

Combatting Antibiotic Resistance Using Surveillance – click on the image to watch the 10 minute video. More details here.

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antibiotic resistance bioinformatics databases lab members

Welcome Brian Alcock

December 16, 2015December 31, 2020 agmcarthur

Brian Alcock has joined the McArthur Lab to lead curation of the Comprehensive Antibiotic Resistance Database (arpcard.mcmaster.ca). Brian recently completed his MSc in the laboratory

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antibiotic resistance BDC bioinformatics databases epidemiology Galaxy genomics lab members presentations

The Inaugural Biomedical Discovery & Commercialization (BDC) Symposium

November 26, 2015December 31, 2020 agmcarthur

Zachary Lin – Adapting Galaxy bioinformatics to outbreak-associated Clostridium difficile The completion of the human genome project in 2001 sparked the beginning of a sequencing revolution

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antibiotic resistance

World Antibiotic Awareness Week

November 17, 2015December 31, 2020 agmcarthur

#WorldAntibioticAwarenessWeek #AntibioticResistance

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McArthur Lab research highlighted in McMaster’s IQ Magazine

November 17, 2015December 31, 2020 agmcarthur

Click on the image to view the complete issue online

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Big Ideas Better Cities – Health and Social Innovation through Big Data

November 5, 2015December 31, 2020 agmcarthur
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antibiotic resistance big data bioinformatics news presentations

Combatting antibiotic resistance using surveillance

November 5, 2015December 31, 2020 agmcarthur

Dr. McArthur gave a MacTalk at McMaster’s Big Ideas Better Cities evenings on Health and Social Innovation through Big Data about “Combatting antibiotic resistance using surveillance”. See

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antibiotic resistance bioinformatics databases epidemiology genomics IIDR lab members presentations

IIDR Trainee Day 2015!

October 25, 2015December 31, 2020 agmcarthur

http://traineeday2015.mcmasteriidr.ca

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antibiotic resistance epidemiology genomes genomics publications

Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium

October 21, 2015December 31, 2020 agmcarthur

Authors: Freschi et al. Front Microbiol. 2015 Sep 29;6:1036. The International Pseudomonas aeruginosa Consortium is sequencing over 1000 genomes and building an analysis pipeline for the study

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Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC)

September 18, 2015December 31, 2020 agmcarthur

Wright, G.D. & A.G. McArthur. 2015. A bioinformatic platform for the characterization of antibiotic resistance in bacterial genomes and metagenomes. Presentation at the 2015 Interscience

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antibiotic resistance big data databases epidemiology publications

Bioinformatics of antimicrobial resistance in the age of molecular epidemiology

July 31, 2015December 31, 2020 agmcarthur

Authors: McArthur AG, Wright GD. Curr Opin Microbiol. 2015 Jul 31;27:45-50. Antimicrobial resistance is a global health challenge and has an evolutionary trajectory ranging from

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antibiotic resistance bioinformatics Galaxy ontologies presentations

Galaxy 2015, ISMB 2015, & BioOntologies 2015

July 20, 2015December 31, 2020 agmcarthur

I spent July travelling to two great meetings in the British Isles. First was the Galaxy Community Conference in Norwich, UK which provided a crash

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antibiotic resistance databases genomes publications

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis

July 8, 2015December 31, 2020 agmcarthur

Authors: Dhillon BK, Laird MR, Shay JA, Winsor GL, Lo R, Nizam F, Pereira SK, Waglechner N, McArthur AG, Langille MG, Brinkman FS. Nucleic Acids Res.

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New Lab Members – Amos Raphenya & Pearl Guo

June 8, 2015December 31, 2020 agmcarthur

  Amos Raphenya and Pearl Guo have joined the McArthur Lab! Amos graduated from McMaster with Bachelor of Computer Engineering in 2008 and joins the lab

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antibiotic resistance big data commercialization presentations

Spectrum Summer Startup

June 1, 2015December 31, 2020 agmcarthur

One of the themes in the McArthurLab is research at the intersection of academia, government, and industry. We endeavour to work with government agencies and

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