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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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antibiotic resistance bioinformatics databases ecotoxicogenomics presentations

Conference Presentations!

June 17, 2017December 30, 2020 agmcarthur

We haven’t been travelling much this year, but our collaborators have been busy! Dearborn, D.C., A.B. Gager, A.G. McArthur, M.E. Gilmour, E. Mandzhukova, R.A. Mauck.

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Antimicrobial resistance surveillance in the genomic age

February 14, 2017December 30, 2020 agmcarthur

McArthur AG & Tsang KK. Ann N Y Acad Sci. 2017 Jan;1388(1):78-91. The loss of effective antimicrobials is reducing our ability to protect the global population from

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antibiotic resistance big data bioinformatics databases publications

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.

January 4, 2017December 30, 2020 agmcarthur

Jia B, Raphenya AR, Alcock B, Waglechner N, Guo P, Tsang KK, Lago BA, Dave BM, Pereira S, Sharma AN, Doshi S, Courtot M, Lo

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antibiotic resistance bioinformatics databases ecotoxicogenomics IIDR P450 phylogenetics presentations text mining

IIDR Trainee Day & USRA Poster Session 2016

November 8, 2016December 30, 2020 agmcarthur

Three of our undergraduate students gave poster presentations in the last month. Arjun Sharma (Biochemistry & Biomedical Sciences 3rd year) outlined his work on developing the

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antibiotic resistance big data bioinformatics databases epidemiology genomics news

Government of Canada invests in new genomics “big data” research projects aimed at real-world challenges

September 13, 2016December 30, 2020 agmcarthur

A cross-national research consortia co-led by McMaster’s Andrew McArthur is receiving two of 16 federal grants to further develop a big data solution to the

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antibiotic resistance bioinformatics databases epidemiology genomics presentations

2nd Conference Rapid Microbial NGS and Bioinformatics: Translation Into Practice

June 14, 2016December 31, 2020 agmcarthur

McArthur, A.G., B. Jia, A.R. Raphenya, P. Guo, K. Tsang, B. Dave, B. Alcock, B. Lago, N. Waglechner, & G.D. Wright. 2016. The Comprehensive Antibiotic Resistance

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antibiotic resistance bioinformatics databases lab members

Welcome Brian Alcock

December 16, 2015December 31, 2020 agmcarthur

Brian Alcock has joined the McArthur Lab to lead curation of the Comprehensive Antibiotic Resistance Database (arpcard.mcmaster.ca). Brian recently completed his MSc in the laboratory

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The Inaugural Biomedical Discovery & Commercialization (BDC) Symposium

November 26, 2015December 31, 2020 agmcarthur

Zachary Lin – Adapting Galaxy bioinformatics to outbreak-associated Clostridium difficile The completion of the human genome project in 2001 sparked the beginning of a sequencing revolution

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antibiotic resistance bioinformatics databases epidemiology genomics IIDR lab members presentations

IIDR Trainee Day 2015!

October 25, 2015December 31, 2020 agmcarthur

http://traineeday2015.mcmasteriidr.ca

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Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC)

September 18, 2015December 31, 2020 agmcarthur

Wright, G.D. & A.G. McArthur. 2015. A bioinformatic platform for the characterization of antibiotic resistance in bacterial genomes and metagenomes. Presentation at the 2015 Interscience

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antibiotic resistance big data databases epidemiology publications

Bioinformatics of antimicrobial resistance in the age of molecular epidemiology

July 31, 2015December 31, 2020 agmcarthur

Authors: McArthur AG, Wright GD. Curr Opin Microbiol. 2015 Jul 31;27:45-50. Antimicrobial resistance is a global health challenge and has an evolutionary trajectory ranging from

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antibiotic resistance databases genomes publications

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis

July 8, 2015December 31, 2020 agmcarthur

Authors: Dhillon BK, Laird MR, Shay JA, Winsor GL, Lo R, Nizam F, Pereira SK, Waglechner N, McArthur AG, Langille MG, Brinkman FS. Nucleic Acids Res.

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New Lab Members – Amos Raphenya & Pearl Guo

June 8, 2015December 31, 2020 agmcarthur

  Amos Raphenya and Pearl Guo have joined the McArthur Lab! Amos graduated from McMaster with Bachelor of Computer Engineering in 2008 and joins the lab

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antibiotic resistance databases epidemiology genomes presentations

4th ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens

May 7, 2015December 31, 2020 agmcarthur

McArthur, A.G., Waglechner, N., Nizam, F., Pereira, S.K., Jia, B., Sardar, D., Westman, E.L., Pawlowski, A.C., Johnson, T., Lo, R., Courtot, M., Brinkman, F.S., Williams,

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Internet of DNA

April 23, 2015December 31, 2020 agmcarthur

“A global network of millions of genomes could be medicine’s next great advance.” See the full article at the MIT Tech Review: Internet of DNA.

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antibiotic resistance databases lab members

New Lab Member Tariq Elsayegh

March 20, 2015December 31, 2020 agmcarthur

The McArthur Lab welcomes Tariq Elsayegh from the Royal College of Surgeons in Ireland, where he is in the six year medical program. Tariq is undertaking a 6

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antibiotic resistance Co-Op positions databases lab members

New Lab Members Justin Jia & Daim Sardar

January 16, 2015December 31, 2020 agmcarthur

  Justin Jia (left) and Daim Sardar (right) have joined the McArthur Lab. Justin has joined as a 8 month McMaster Honours Biochemistry – Biomedical Research

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antibiotic resistance databases publications

The Comprehensive Antibiotic Resistance Database

June 20, 2013December 31, 2020 agmcarthur

Authors: AG McArthur, N Waglechner, F Nizam, A Yan, MA Azad, AJ Baylay, K Bhullar, MJ Canova, G De Pascale, L Ejim, L Kalan, AM

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antibiotic resistance databases ecotoxicogenomics news

McArthur Bioinformatics Consulting 2006-2014

May 22, 2006December 31, 2020 agmcarthur

In 2006, Dr. McArthur left academia to act as a consultant in computational biology and bioinformatics for researchers in academia and government. With researchers at the

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