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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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bioinformatics COVID19 epidemiology genomics molecular epidemiology SARS-CoV-2 virus epidemiology

Genomic Epidemiology of SARS-CoV-2: Canada & Ontario

January 15, 2021January 15, 2021 agmcarthur

In collaboration with our colleague Dr. Finlay Maguire (Dalhousie University) and as part of our ongoing work for Ontario’s COVID-19 Genomics Rapid Response Coalition and the Canadian

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bioinformatics genomics IIDR lab members news

Amos Raphenya, MSc Student

January 14, 2021 agmcarthur

It is with great pleasure the McArthur lab announces that Lead Developer for the Comprehensive Antibiotic Resistance Database (CARD), Amos Raphenya, is starting his M.Sc.

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antibiotic resistance big data genomics publications

Identifying novel β-lactamase substrate activity through in silico prediction of antimicrobial resistance

January 8, 2021January 8, 2021 agmcarthur

Kara K. Tsang, Finlay Maguire, Haley L. Zubyk, Sommer Chou, Arman Edalatmand, Gerard D. Wright, Robert G. Beiko, & Andrew G. McArthur Microbial Genomics, in

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antibiotic resistance genomics publications

Recurrent multidrug-resistant Salmonella enterica serovar Typhimurium bacteremia in a returned traveller

December 16, 2020December 30, 2020 agmcarthur

Adam S Komorowski, Xena X Li, Eva Piessens, Andrew G McArthur, & Ameen Patel Journal of the Association of Medical Microbiology and Infectious Disease Canada,

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bioinformatics genomics publications virulence

Structural basis for effector transmembrane domain recognition by type VI secretion system chaperones

December 16, 2020December 30, 2020 agmcarthur

Shehryar Ahmad, Kara L Tsang, Kartik Sachar, Dennis Quentin, Tahmid M Tashin, Nathan P Bullen, Stefan Raunser, Andrew G McArthur, Gerd Prehna, & John C

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ASMNGS 2020 Virtual Conference – 4th ASM Conference on Rapid Applied Microbial Next-Generation Sequencing and Bioinformatic Pipelines

December 10, 2020December 30, 2020 agmcarthur

Aaron Petkau performed his Visual & Automated Disease Analytics Program internship (Univ. of Manitoba) with us during the summer of 2020, creating the CARD:Live graphic

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antibiotic resistance bioinformatics COVID19 databases epidemiology genomics IIDR lab members molecular epidemiology presentations SARS-CoV-2 text mining virus epidemiology

IIDR Trainee Day 2020! Forging the Future of Infectious Disease Research

November 11, 2020December 30, 2020 agmcarthur

Nasir, J.A et al. 2020. SIGNALing the Need for Surveillance: A Comparison of Whole Genome Sequencing Methods for SARS-CoV-2. Edalatmand, A. & A.G. McArthur. 2020.

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big data bioinformatics COVID19 epidemiology genomics IIDR molecular epidemiology news SARS-CoV-2 virus epidemiology

McArthur Lab & McMaster contribute to global genomic surveillance of SARS-CoV-2

October 21, 2020December 30, 2020 agmcarthur

 

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antibiotic resistance genomics graduation lab members software

Congratulations Martins Oloni!

September 11, 2020December 30, 2020 agmcarthur

Congratulations Martins Oloni on the successful defence of your Masters of Science! New Delhi Metallo-Beta-Lactamase (NDM) plasmid predictions The complete detection and genome sequencing of

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bioinformatics COVID19 epidemiology genomics molecular epidemiology publications SARS-CoV-2 software virus epidemiology

A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait Capture

August 18, 2020December 30, 2020 agmcarthur

Jalees A. Nasir, Robert A. Kozak, Patryk Aftanas, Amogelang R. Raphenya, Kendrick M. Smith, Finlay Maguire, Hassaan Maan, Muhannad Alruwaili, Arinjay Banerjee, Hamza Mbareche, Brian

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