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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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bioinformatics ecotoxicogenomics genomics news

Role of nuclear factor, erythroid 2 (Nfe2) in the oxidative stress response during development

October 29, 2015December 31, 2020 agmcarthur

A new NIH-funded collaboration with Dr. Larissa Williams, Bates College, USA that applies transcriptomic approaches to examination of the role Nfe2 in oxidative stress response during

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antibiotic resistance bioinformatics databases epidemiology genomics IIDR lab members presentations

IIDR Trainee Day 2015!

October 25, 2015December 31, 2020 agmcarthur

http://traineeday2015.mcmasteriidr.ca

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antibiotic resistance epidemiology genomes genomics publications

Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium

October 21, 2015December 31, 2020 agmcarthur

Authors: Freschi et al. Front Microbiol. 2015 Sep 29;6:1036. The International Pseudomonas aeruginosa Consortium is sequencing over 1000 genomes and building an analysis pipeline for the study

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genomics population genomics publications

Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADSeq)

October 13, 2015December 31, 2020 agmcarthur

Authors: Graham CF, Glenn TC, McArthur AG, Boreham DR, Kieran T, Lance S, Manzon RG, Martino JA, Pierson T, Rogers SM, Wilson JY, Somers CM. Mol Ecol

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lab members

New Undergraduates in the Lab!

September 30, 2015December 31, 2020 agmcarthur

  Welcome to the lab (in order) Arjun Sharma, Biren Dave, Kara Tsang, Zachary Lin, and Sachin Doshi! Zachary & Kara are performing their BiomedDC

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antibiotic resistance bioinformatics databases epidemiology presentations software

Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC)

September 18, 2015December 31, 2020 agmcarthur

Wright, G.D. & A.G. McArthur. 2015. A bioinformatic platform for the characterization of antibiotic resistance in bacterial genomes and metagenomes. Presentation at the 2015 Interscience

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BDC commercialization teaching

Welcome to the 2015-2016 BDC Cohort!

September 10, 2015December 31, 2020 agmcarthur

McMaster’s Biomedical Discovery & Commercialization Program, http://bdcprogram-mcmaster.ca    

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Co-Op positions lab members

Justin Jia & Pearl Guo head back to classes

September 2, 2015December 31, 2020 agmcarthur
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ecotoxicogenomics Learning Portfolio McMaster news text mining

Some recent lab news…

August 24, 2015December 31, 2020 agmcarthur

The McArthurLab receives funding from the Canadian Foundation for Innovation: Twelve McMaster research projects receive more than $2.4-million     Dr. McArthur to be a @McMasterU Learning

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antibiotic resistance big data databases epidemiology publications

Bioinformatics of antimicrobial resistance in the age of molecular epidemiology

July 31, 2015December 31, 2020 agmcarthur

Authors: McArthur AG, Wright GD. Curr Opin Microbiol. 2015 Jul 31;27:45-50. Antimicrobial resistance is a global health challenge and has an evolutionary trajectory ranging from

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genomics kinesiology McMaster news

‘Omic’ Responses & Inactivity in Aging

July 26, 2015December 31, 2020 agmcarthur

The McArthur lab is proud to collaborate with colleagues in the Faculty of Science on the metabolic and transcriptional responses to human inactivity and aging under

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antibiotic resistance bioinformatics Galaxy ontologies presentations

Galaxy 2015, ISMB 2015, & BioOntologies 2015

July 20, 2015December 31, 2020 agmcarthur

I spent July travelling to two great meetings in the British Isles. First was the Galaxy Community Conference in Norwich, UK which provided a crash

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antibiotic resistance databases genomes publications

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis

July 8, 2015December 31, 2020 agmcarthur

Authors: Dhillon BK, Laird MR, Shay JA, Winsor GL, Lo R, Nizam F, Pereira SK, Waglechner N, McArthur AG, Langille MG, Brinkman FS. Nucleic Acids Res.

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antibiotic resistance Co-Op positions databases ecotoxicogenomics Galaxy lab members news

New Lab Members – Amos Raphenya & Pearl Guo

June 8, 2015December 31, 2020 agmcarthur

  Amos Raphenya and Pearl Guo have joined the McArthur Lab! Amos graduated from McMaster with Bachelor of Computer Engineering in 2008 and joins the lab

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antibiotic resistance big data commercialization presentations

Spectrum Summer Startup

June 1, 2015December 31, 2020 agmcarthur

One of the themes in the McArthurLab is research at the intersection of academia, government, and industry. We endeavour to work with government agencies and

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antibiotic resistance IIDR news worth reading

Wright & Brown: The greatest threat of our time — antibiotic resistance

May 8, 2015December 31, 2020 agmcarthur

Read the full article at The National Post.

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antibiotic resistance databases epidemiology genomes presentations

4th ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens

May 7, 2015December 31, 2020 agmcarthur

McArthur, A.G., Waglechner, N., Nizam, F., Pereira, S.K., Jia, B., Sardar, D., Westman, E.L., Pawlowski, A.C., Johnson, T., Lo, R., Courtot, M., Brinkman, F.S., Williams,

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big data databases epidemiology genomes worth reading

Internet of DNA

April 23, 2015December 31, 2020 agmcarthur

“A global network of millions of genomes could be medicine’s next great advance.” See the full article at the MIT Tech Review: Internet of DNA.

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gender issues worth reading

Reflecting on Fifty Years of Progress for Women in Science

April 23, 2015December 31, 2020 agmcarthur

Dr. Nancy Hopkins’ article is a worthy read. Hopkins, Nancy. Reflecting on Fifty Years of Progress for Women in Science. DNA and Cell Biology. March 2015,

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antibiotic resistance databases lab members

New Lab Member Tariq Elsayegh

March 20, 2015December 31, 2020 agmcarthur

The McArthur Lab welcomes Tariq Elsayegh from the Royal College of Surgeons in Ireland, where he is in the six year medical program. Tariq is undertaking a 6

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