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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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10 Years of the McArthur Lab at McMaster University

September 25, 2024October 3, 2024 agmcarthur

71 undergraduates, 9 MSc, 16 MBDC, 6 PhD, 2 PDF, and 12 staff, co-ops, and summer students! And 50+ publications!

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New MSc Students

September 12, 2024September 12, 2024 agmcarthur

This September we welcome new graduate students Tiffany Ta and Suhayb Hafiz. Tiffany joins us from the McMaster Biomedical Discovery & Commercialization program and will

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Thesis Student 2024-2025

September 12, 2024September 12, 2024 agmcarthur

Welcome to the lab thesis students Trisha Parchoor, Sidrah Shaikh, Nilasha Mohan, & Abby Williams!

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Mini-Golf 2024

July 25, 2024August 5, 2024 agmcarthur

Lab alumni Arman Edalatmand returned and won the match!

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antibiotic resistance databases genomics lab members presentations SARS-CoV-2 software

CSM, EDAR7, & more!

July 23, 2024July 24, 2024 agmcarthur

  CSM Mukiri, K.M., B.P. Alcock, & A.G. McArthur. 2024. Increasing the predictive accuracy of the Resistance Gene Identifier by abandoning sole reliance on bitscore.

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antibiotic resistance bioinformatics databases genomics publications software

Pre-Prints 2024!

May 10, 2024June 3, 2024 agmcarthur

Gill, E.E., B. Jia, C.L. Murall, R. Poujol, M.Z. Anwar, N.S. John, J. Richardsson, A. Hobb, A.S. Olabode, A. Lepsa, A.T. Duggan, A.D. Tyler, A.

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Summer Crew 2024

May 1, 2024June 17, 2024 agmcarthur

  Welcome to BDC post-grad Tiffany Ta, and incoming thesis students Nilasha Mohan and Sidrah Shaikh to their summer placements!

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antibiotic resistance bioinformatics databases genomics presentations

Presentations at the AMMI-CACMID 2024 Conference

April 13, 2024May 10, 2024 agmcarthur

Alcock, B.P., E.A. Bordeleau, & A.G McArthur. 2024. Improving aminoglycoside resistance surveillance and stewardship efforts through nomenclature harmonization with the Comprehensive Antibiotic Resistance Database. Presentation

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antibiotic resistance big data bioinformatics databases genomics molecular epidemiology presentations

Antimicrobial Resistance – Genomes, Big Data and Emerging Technologies – Wellcome Trust, UK

March 15, 2024March 15, 2024 agmcarthur

Mukiri, K.M., B.P. Alcock, & A.G. McArthur. 2024. Increasing the predictive accuracy of the Resistance Gene Identifier by abandoning sole reliance on bitscore. Ta, T.E.,

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awards lab members presentations

BBSRS 2024

March 11, 2024March 11, 2024 agmcarthur

Congratulations to Colin Bruce for winning First Place PhD poster at the Biochemistry & Biomedical Sciences Research Symposium!

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antibiotic resistance genomics publications

Minimal impact on the resistome of children in Botswana after azithromycin treatment for acute severe diarrhoeal disease

February 3, 2024February 3, 2024 agmcarthur

Allison K Guitor, Anna Katyukhina, Margaret Mokomane, Kwana Lechiile, David M Goldfarb, Gerard D Wright, Andrew G McArthur, & Jeffrey M Pernica J Infect Dis.

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clinical metadata COVID19 genomics molecular epidemiology publications SARS-CoV-2 virus epidemiology

Chronic COVID-19 infection in an immunosuppressed patient shows changes in lineage over time: a case report

January 5, 2024 agmcarthur

Sheridan J C Baker , Landry E Nfonsam , Daniela Leto , Candy Rutherford , Marek Smieja , & Andrew G McArthur Virol J. 2024

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publications

Macrophage AMPK β1 activation by PF-06409577 reduces the inflammatory response, cholesterol synthesis, and atherosclerosis in mice

December 1, 2023 agmcarthur

Day, E.A., L.K. Townsend, S. Rehal, B. Batchuluun, D. Wang, M.R. Morrow, R. Lu, L. Lundenberg, J.H. Lu, E.M. Desjardins, A.R. Raphenya, A.G. McArthur, M.D.

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antibiotic resistance databases ontologies publications

A standardized nomenclature for resistance-modifying agents in the Comprehensive Antibiotic Resistance Database

November 20, 2023November 20, 2023 agmcarthur

Keaton W Smith, Brian P Alcock, Shawn French, Maya A Farha, Amogelang R Raphenya, Eric D Brown, & Andrew G McArthur. Microbiol Spectrum. 2023 Nov

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antibiotic resistance big data bioinformatics databases epidemiology genomics IIDR lab members molecular epidemiology ontologies presentations software text mining

IIDR Trainee Day 2023

November 13, 2023November 13, 2023 agmcarthur

COLIN BRUCE – Investigating Fibre Degradation in the Infant Gut Microbiota ; DIRK HACKENBERGER – Was World War 2 Foundational to the Antimicrobial Resistance Crisis?

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genomics IIDR Mitacs molecular epidemiology presentations virulence

ID-IIDR Rounds – Clostridioides (Clostridium) difficile: new insights from the clinic and laboratory

November 1, 2023December 1, 2023 agmcarthur

This one-hour webinar features talks from Marek Smieja (Professor, Pathology & Molecular Medicine), Sheridan Baker (Postdoctoral Fellow, The McArthur Lab and Smieja Lab), and Maddie

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bioinformatics genomics lab members

Welcome to the McArthur Lab Undergraduate Crew 2023-2024!

September 5, 2023August 28, 2023 agmcarthur

2023-2024 Thesis & Inquiry Course Students Kriti Goel (3rd year Biochemistry) – BIOCHEM 3R06 Tiffany Ta (4th year Biomedical Discovery & Commercialization) – BIOMEDDC 4A15 Kristine

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antibiotic resistance bioinformatics clinical metadata genomics lab members molecular epidemiology

Welcome Dr. Brody Duncan!

September 1, 2023August 28, 2023 agmcarthur

The McArthur lab welcomes Brody Duncan, M.D. (Hamilton Health Sciences) as he starts his M.Sc. studies with us, investigating standards and methods for clinical reporting

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lab members

Mini-Golf 2023

July 17, 2023August 28, 2023 agmcarthur

Amogelang Raphenya makes his triumphant return to the top of the leaderboard!

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antibiotic resistance COVID19 genomics lab members presentations SARS-CoV-2 software

Canadian Society of Microbiologists 2023

June 28, 2023July 3, 2023 agmcarthur

Baker, S.J.C., J. Maciejewski, M.-T. Usuanlele, J. Gilchrist, D.R. Sharma, D. Bulir, M. Smieja, M. Loeb, M.G. Surette, A.G. McArthur, & D. Mertz. 2023. Investigating

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