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Michael G. DeGroote Institute for Infectious Disease Research, McMaster University

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antibiotic resistance bioinformatics databases ontologies publications

Antimicrobial resistance surveillance in the genomic age

February 14, 2017December 30, 2020 agmcarthur

McArthur AG & Tsang KK. Ann N Y Acad Sci. 2017 Jan;1388(1):78-91. The loss of effective antimicrobials is reducing our ability to protect the global population from

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antibiotic resistance big data bioinformatics databases publications

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.

January 4, 2017December 30, 2020 agmcarthur

Jia B, Raphenya AR, Alcock B, Waglechner N, Guo P, Tsang KK, Lago BA, Dave BM, Pereira S, Sharma AN, Doshi S, Courtot M, Lo

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antibiotic resistance bioinformatics ecotoxicogenomics lab members

Farewell Briony Lago!

January 3, 2017December 30, 2020 agmcarthur

This month we say farewell to Briony Lago as she returns to her undergraduate studies in Chemical Biology at McMaster. Briony joined us as part

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antibiotic resistance genomics publications

A diverse intrinsic antibiotic resistome from a cave bacterium

December 8, 2016December 30, 2020 agmcarthur

Pawlowski AC, Wang W, Koteva K, Barton HA, McArthur AG, & Wright GD. Nat Commun. 2016 Dec 8;7:13803. Antibiotic resistance is ancient and widespread in

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antibiotic resistance news publications

Forum on Genomics and Antimicrobial Resistance – Workshop Report

December 1, 2016December 30, 2020 agmcarthur

The McArthur lab and the Comprehensive Antibiotic Resistance Database are proud to have contributed to the Genome Canada – Canadian Food Inspection Agency Forum on

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antibiotic resistance bioinformatics databases ecotoxicogenomics IIDR P450 phylogenetics presentations text mining

IIDR Trainee Day & USRA Poster Session 2016

November 8, 2016December 30, 2020 agmcarthur

Three of our undergraduate students gave poster presentations in the last month. Arjun Sharma (Biochemistry & Biomedical Sciences 3rd year) outlined his work on developing the

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antibiotic resistance big data bioinformatics publications

YphC and YsxC GTPases assist the maturation of the central protuberance, GTPase associated region and functional core of the 50S ribosomal subunit

October 11, 2016December 30, 2020 agmcarthur

Ni X, Davis JH, Jain N, Razi A, Benlekbir S, McArthur AG, Rubinstein JL, Britton RA, Williamson JR, Ortega J. Nucleic Acids Res. 2016 Sep

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antibiotic resistance big data bioinformatics databases epidemiology genomics news

Government of Canada invests in new genomics “big data” research projects aimed at real-world challenges

September 13, 2016December 30, 2020 agmcarthur

A cross-national research consortia co-led by McMaster’s Andrew McArthur is receiving two of 16 federal grants to further develop a big data solution to the

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antibiotic resistance bioinformatics ecotoxicogenomics lab members

New Graduate Students!

September 8, 2016December 31, 2020 agmcarthur

Kara Tsang (graduate, McMaster BDC) – Kara did her BiomedDC 4A15 thesis in the lab, focused on Pseudomonas resistome prediction and cystic fibrosis-associated metagenomic sequencing

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antibiotic resistance big data worth reading

The Superbugs are Coming. Data Science Can Help.

June 20, 2016December 31, 2020 agmcarthur

Read more at http://techonomy.com/2016/06/the-superbugs-are-coming-data-science-can-help/

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antibiotic resistance bioinformatics databases epidemiology genomics presentations

2nd Conference Rapid Microbial NGS and Bioinformatics: Translation Into Practice

June 14, 2016December 31, 2020 agmcarthur

McArthur, A.G., B. Jia, A.R. Raphenya, P. Guo, K. Tsang, B. Dave, B. Alcock, B. Lago, N. Waglechner, & G.D. Wright. 2016. The Comprehensive Antibiotic Resistance

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antibiotic resistance lab members publications

Recent McArthur Lab Presentations and Posters

June 14, 2016December 31, 2020 agmcarthur

McMaster Interdisciplinary Research Exposition (MIREx); Ontario Biology Day; Biomedical Discovery and Commercialization Engage Symposium; Rapid Microbial NGS and Bioinformatics: Translation Into Practice (Germany); Canadian Food Inspection Agency Forum on

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antibiotic resistance BDC bioinformatics epidemiology genomics lab members presentations

BDC Engage 2016!

April 6, 2016December 31, 2020 agmcarthur

Congratulations to Kara Tsang and Zachary Lin on completion of their Biomedical Discovery and Commercialization (BDC) 4A15 thesis research! Both Kara & Zachary presented their research

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antibiotic resistance lab members news software

Arjun Sharma – creator of the new AMR Forums

February 4, 2016December 31, 2020 agmcarthur

Arjun Sharma is a 2cd year Biochemistry & Biomedical Sciences student how as a volunteer designed and created the new AMR Forums! Learn more about

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antibiotic resistance big data bioinformatics epidemiology genomics presentations YouTube

Big Ideas Better Cities – Health and Social Innovation through Big Data – Full Video

January 12, 2016December 31, 2020 agmcarthur

Combatting Antibiotic Resistance Using Surveillance – click on the image to watch the 10 minute video. More details here.

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antibiotic resistance bioinformatics databases lab members

Welcome Brian Alcock

December 16, 2015December 31, 2020 agmcarthur

Brian Alcock has joined the McArthur Lab to lead curation of the Comprehensive Antibiotic Resistance Database (arpcard.mcmaster.ca). Brian recently completed his MSc in the laboratory

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antibiotic resistance BDC bioinformatics databases epidemiology Galaxy genomics lab members presentations

The Inaugural Biomedical Discovery & Commercialization (BDC) Symposium

November 26, 2015December 31, 2020 agmcarthur

Zachary Lin – Adapting Galaxy bioinformatics to outbreak-associated Clostridium difficile The completion of the human genome project in 2001 sparked the beginning of a sequencing revolution

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antibiotic resistance

World Antibiotic Awareness Week

November 17, 2015December 31, 2020 agmcarthur

#WorldAntibioticAwarenessWeek #AntibioticResistance

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antibiotic resistance big data

McArthur Lab research highlighted in McMaster’s IQ Magazine

November 17, 2015December 31, 2020 agmcarthur

Click on the image to view the complete issue online

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antibiotic resistance big data bioinformatics presentations YouTube

Big Ideas Better Cities – Health and Social Innovation through Big Data

November 5, 2015December 31, 2020 agmcarthur
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